August 2006
July 2006
April 2006
ToBiX
Tools for bioinformatics - liveCD
March 2006
Molecular Linux
Molecular Biology related programs for Linux
Simloc
detection of local similarities
Naccess
Naccess is a stand alone program that calculates the accessible area of a molecule from a PDB (Protein Data Bank) format file.
GRAMM
GRAMM is a program for protein docking.
Xebece
Xebece is a multipurpose tool for information visualization and organization.
the prefuse visualization toolkit
by 5 othersA Java-based toolkit for building interactive information visualization applications.
DomainFinder
DomainFinder is an interactive program for the determination and characterization of dynamical domains in proteins.
xmolwt
Calculate formula weight and percent of each element for a given formula.
TreeView X
A phylogenetic tree viewer
TINKER Molecular Modeling Package
A general purpose molecular modelling package
T-coffee
A multiple DNA or protein sequence alignment package.
SeaView
Multiple DNA/protein sequence alignment editor.
PovChem
Simple yet powerful tool to generate POV from a PDB file
platon
Tool for viewing molecular/crystallographic structures.
PAML
Phylogenetic Analysis by Maximum Likelihood (PAML)
